BioinformaticsPlus > 3D-SPECS > GDB3447A

BLAST against:

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IDENTIFIERS: GDB3447A | IFNA13 | gi|194394174 | GeneID=3447 | Length=190 | TM=0
DESCRIPTION: interferon, alpha 13 precursor [Homo sapiens].
MGC STATUS: YES [BC069427:AT130-A12 SeqId=100.0 Overlap=99.5 QR=2-190/190 MR=1-189/189];
YES [BC112002:AT128-F7 SeqId=100.0 Overlap=99.5 QR=2-190/190 MR=1-189/189];
YES [BC093988:AT120-A3 SeqId=100.0 Overlap=99.5 QR=2-190/190 MR=1-189/189]

Pfam Domain Diagram

Domain Information

3D-SPECS
ID
GENBANK
GI
INDEX START
RESIDUE
STOP
RESIDUE
PFAM IDENTIFIER
(Click to display all human targets with this domain type)
PFAM
WEBSITE
(External Link)
MATCH
E-VALUE
(OVERLAP)
PDB
STATUS
GDB3447A gi|194394174 1 22 188 PF00143:Interferon PFAM 1e-78
(100.0%)
PDB80-95:QOV>=50:MOV>=50
[gnl|PDB_ATOM|1RH2_F SeqId=84.0 QR=4-166/167 QOV=97.6 MR=1-162/165 MOV=98.2]

Crystallisation Information

3D-SPECS
ID
GENBANK
GI
INDEX START
RESIDUE
STOP
RESIDUE
XTALPRED
CLASS
PDB TEMPLATE CONFIDENCE TOP PDB MATCH
GDB3447A gi|194394174 1 25 190 5 1ITFA0 CERT PDB80-95:QOV>=50:MOV>=50
[gnl|PDB_SEQRES|1RH2_F SeqId=83.7 QR=1-166/166 QOV=100.0 MR=1-165/165 MOV=100.0]

Crystallisation Class Key

1 Optimal
2 Suboptimal
3 Average
4 Difficult
5 Very difficult