BioinformaticsPlus > 3D-SPECS > GDB50618A

BLAST against:

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IDENTIFIERS: GDB50618A | ITSN2 | gi|194294521 | GeneID=50618 | Length=1697 | TM=0
DESCRIPTION: intersectin 2 isoform 1 [Homo sapiens].
MGC STATUS: NO

Pfam Domain Diagram

Domain Information

3D-SPECS
ID
GENBANK
GI
INDEX START
RESIDUE
STOP
RESIDUE
PFAM IDENTIFIER
(Click to display all human targets with this domain type)
PFAM
WEBSITE
(External Link)
MATCH
E-VALUE
(OVERLAP)
PDB
STATUS
GDB50618A gi|194294521 1 114 240 PF06604:OMP_19 PFAM 0.001
(65.7%)
No match above 50 percent sequence identity
GDB50618A gi|194294521 2 298 429 PF07946:DUF1682 PFAM 4e-04
(40.6%)
No match above 50 percent sequence identity
GDB50618A gi|194294521 3 421 754 PF02463:SMC_N PFAM 5e-16
(29.5%)
No match above 50 percent sequence identity
GDB50618A gi|194294521 4 762 816 PF00018:SH3_1 PFAM 1e-11
(96.4%)
PDB95-100:QOV>=50:MOV>=50
[gnl|PDB_ATOM|1UFF_A SeqId=100.0 QR=1-55/55 QOV=100.0 MR=8-62/93 MOV=59.1]
GDB50618A gi|194294521 5 902 953 PF07653:SH3_2 PFAM 1e-10
(100.0%)
PDB95-100:QOV>=50:MOV>=50
[gnl|PDB_ATOM|1J3T_A SeqId=100.0 QR=1-52/52 QOV=100.0 MR=12-63/74 MOV=70.3]
GDB50618A gi|194294521 6 984 1037 PF00018:SH3_1 PFAM 4e-13
(100.0%)
PDB95-100:QOV>=50:MOV>=50
[gnl|PDB_ATOM|1UHF_A SeqId=100.0 QR=1-54/54 QOV=100.0 MR=9-62/69 MOV=78.3]
GDB50618A gi|194294521 7 1063 1112 PF00018:SH3_1 PFAM 2e-07
(82.1%)
PDB95-100:QOV>=50:MOV>=50
[gnl|PDB_ATOM|1UE9_A SeqId=100.0 QR=1-50/50 QOV=100.0 MR=15-64/80 MOV=62.5]
GDB50618A gi|194294521 8 1131 1183 PF00018:SH3_1 PFAM 2e-15
(96.4%)
PDB95-100:QOV>=50:MOV<50
[gnl|PDB_ATOM|3GF9_A SeqId=100.0 QR=1-53/53 QOV=100.0 MR=20-72/295 MOV=18.0]
GDB50618A gi|194294521 9 1214 1394 PF00621:RhoGEF PFAM 5e-24
(99.5%)
PDB95-100:QOV>=50:MOV<50
[gnl|PDB_ATOM|3JZY_A SeqId=100.0 QR=1-181/181 QOV=100.0 MR=32-212/510 MOV=35.5]
GDB50618A gi|194294521 10 1571 1652 PF00168:C2 PFAM 8e-20
(100.0%)
PDB95-100:QOV>=50:MOV<50
[gnl|PDB_ATOM|3JZY_A SeqId=100.0 QR=1-82/82 QOV=100.0 MR=389-470/510 MOV=16.1]

Crystallisation Information

3D-SPECS
ID
GENBANK
GI
INDEX START
RESIDUE
STOP
RESIDUE
XTALPRED
CLASS
PDB TEMPLATE CONFIDENCE TOP PDB MATCH
GDB50618A gi|194294521 1 7 104 4 3FIAA0 CERT PDB50-80:QOV>=50:MOV>=50
[gnl|PDB_ATOM|2KHN_A SeqId=72.4 QR=1-98/98 QOV=100.0 MR=16-113/121 MOV=81.0]
GDB50618A gi|194294521 2 233 343 4 2KGRA0 CERT PDB50-80:QOV>=50:MOV>=50
[gnl|PDB_ATOM|2KGR_A SeqId=67.3 QR=3-100/111 QOV=88.3 MR=3-100/111 MOV=88.3]
GDB50618A gi|194294521 3 761 845 5 1UFFA0 PDB95-100:BLAST PDB95-100:QOV>=50:MOV>=50
[gnl|PDB_ATOM|1UFF_A SeqId=97.6 QR=2-85/85 QOV=98.8 MR=8-91/93 MOV=90.3]
GDB50618A gi|194294521 4 898 958 5 1J3TA0 PDB95-100:BLAST PDB95-100:QOV>=50:MOV>=50
[gnl|PDB_ATOM|1J3T_A SeqId=100.0 QR=1-61/61 QOV=100.0 MR=8-68/74 MOV=82.4]
GDB50618A gi|194294521 5 984 1038 5 1UHFA0 PDB95-100:BLAST PDB95-100:QOV>=50:MOV>=50
[gnl|PDB_ATOM|1UHF_A SeqId=100.0 QR=1-55/55 QOV=100.0 MR=9-63/69 MOV=79.7]
GDB50618A gi|194294521 6 1049 1123 5 1UE9A0 PDB80-95:BLAST PDB80-95:QOV>=50:MOV>=50
[gnl|PDB_ATOM|1UE9_A SeqId=92.0 QR=1-75/75 QOV=100.0 MR=1-75/80 MOV=93.8]
GDB50618A gi|194294521 7 1130 1406 3 3GF9A0 PDB95-100:BLAST PDB95-100:QOV>=50:MOV>=50
[gnl|PDB_SEQRES|3GF9_A SeqId=100.0 QR=1-277/277 QOV=100.0 MR=19-295/295 MOV=93.9]
GDB50618A gi|194294521 8 1407 1567 4 3JZYA0 PDB95-100:BLAST PDB95-100:QOV>=50:MOV<50
[gnl|PDB_SEQRES|3JZY_A SeqId=99.4 QR=1-161/161 QOV=100.0 MR=225-385/510 MOV=31.6]
GDB50618A gi|194294521 9 1562 1697 2 3B7YA0 CERT PDB95-100:QOV>=50:MOV<50
[gnl|PDB_ATOM|3JZY_A SeqId=100.0 QR=1-131/136 QOV=96.3 MR=380-510/510 MOV=25.7]

Crystallisation Class Key

1 Optimal
2 Suboptimal
3 Average
4 Difficult
5 Very difficult