BioinformaticsPlus > 3D-SPECS > GDB64843A

BLAST against:

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IDENTIFIERS: GDB64843A | ISL2 | gi|21956641 | GeneID=64843 | Length=359 | TM=0
DESCRIPTION: ISL LIM homeobox 2 [Homo sapiens].
MGC STATUS: YES [BC012136:AU65-H2 SeqId=100.0 Overlap=100.0 QR=1-359/359 MR=1-359/359];
YES [BC011967:AT17-A8 SeqId=100.0 Overlap=100.0 QR=1-359/359 MR=1-359/359]

Pfam Domain Diagram

Domain Information

3D-SPECS
ID
GENBANK
GI
INDEX START
RESIDUE
STOP
RESIDUE
PFAM IDENTIFIER
(Click to display all human targets with this domain type)
PFAM
WEBSITE
(External Link)
MATCH
E-VALUE
(OVERLAP)
PDB
STATUS
GDB64843A gi|21956641 1 27 85 PF00412:LIM PFAM 2e-13
(100.0%)
No match above 50 percent sequence identity
GDB64843A gi|21956641 2 89 143 PF00412:LIM PFAM 2e-11
(93.0%)
PDB50-80:QOV>=50:MOV<50
[gnl|PDB_ATOM|2RGT_B SeqId=53.6 QR=1-55/55 QOV=100.0 MR=68-123/169 MOV=33.1]
GDB64843A gi|21956641 3 193 248 PF00046:Homeobox PFAM 2e-13
(98.2%)
PDB95-100:QOV>=50:MOV>=50
[gnl|PDB_ATOM|1BW5_A SeqId=100.0 QR=1-56/56 QOV=100.0 MR=5-60/66 MOV=84.8]

Crystallisation Information

3D-SPECS
ID
GENBANK
GI
INDEX START
RESIDUE
STOP
RESIDUE
XTALPRED
CLASS
PDB TEMPLATE CONFIDENCE TOP PDB MATCH
GDB64843A gi|21956641 1 25 173 5 2RGTA0 CERT No match above 50 percent sequence identity
GDB64843A gi|21956641 2 190 254 5 1BW5A0 PDB95-100:BLAST PDB95-100:QOV>=50:MOV>=50
[gnl|PDB_ATOM|1BW5_A SeqId=96.9 QR=1-65/65 QOV=100.0 MR=2-66/66 MOV=98.5]

Crystallisation Class Key

1 Optimal
2 Suboptimal
3 Average
4 Difficult
5 Very difficult